The detailed information of tRNA gene sequence


Sequence ID>W08001892
Genome IDABEA01000309
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesGeminisphaera colitermitum TAV2 [ABEA]
Start position on genome 4061
End posion on genome 3988
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttcccattcc
tRNA gene sequence 
GGGGTGGTAGCTCAGCTGGTTAGAGCGTCTGCCTGTCACGCAGAAGGTCGCGGGTTCGAG
TCCCGTCCATCCCGcca
Downstream region at tRNA end position 
gttttgaaaa
Secondary structure (Cloverleaf model)
>W08001892	Asp	GTC
                   c      Gcca gttttgaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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