The detailed information of tRNA gene sequence


Sequence ID>W08007711
Genome IDABKK01000044
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile CIP 107932 [ABKK]
Start position on genome 175
End posion on genome 248
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaaaaaggc
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGTGGACTGCAACTCCTTGATCCCCAGTTCGAATCT
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
ataaaatgcg
Secondary structure (Cloverleaf model)
>W08007711	Cys	GCA
                   c      TCCA ataaaatgcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    G + T
                    T   T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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