The detailed information of tRNA gene sequence


Sequence ID>W141106623
Genome IDAVPW01000017
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus VPCR-2010 [AVPW]
Start position on genome 2290
End posion on genome 2214
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agacgatact
tRNA gene sequence 
GGGTCTGTAGCTCAGGTGGTTAGAGCGTTCGCCTGATAAGCGAGAGGTCGGTGGTTCGAG
TCCACTCAGACCCACCA
Downstream region at tRNA end position 
attcctttta
Secondary structure (Cloverleaf model)
>W141106623	Ile	GAT
                   t      ACCA attcctttta
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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