The detailed information of tRNA gene sequence


Sequence ID>W141107054
Genome IDAVQI01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 62268
End posion on genome 62193
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctttcgtttt
tRNA gene sequence 
CGGGATATAGCGCAGCCGGTAGCGCGCTTGCTTTGGGAGCAAGATGTCGGGCGTTCGAAC
CGCCCTATCCCGACTA
Downstream region at tRNA end position 
acggaaaccg
Secondary structure (Cloverleaf model)
>W141107054	Pro	TGG
                   t      ACTA acggaaaccg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          C A
                    T     C C C G C     A
      C G A        A      | | | | |     G
    C       C G C G       G G G C G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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