The detailed information of tRNA gene sequence


Sequence ID>W141107057
Genome IDAVQI01000008
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 421
End posion on genome 493
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gattgagtac
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGTAGAGCAACAGACTCTTAATCTGTGGGTCGTCGGTTCGAAG
CCGGCATGGCTCAagc
Downstream region at tRNA end position 
cttgtgtgag
Secondary structure (Cloverleaf model)
>W141107057	Lys	CTT
                   c      Aagc cttgtgtgag
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          G A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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