The detailed information of tRNA gene sequence


Sequence ID>W141107058
Genome IDAVQI01000008
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 529
End posion on genome 611
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cactctttaT
tRNA gene sequence 
GCGAGAGTGGTGAAACGGCAGACACGCCGGATTTAGGTTCCGGTGCCTTACGGCGTAAGG
GTTCAAGTCCCTTCTCTCGCAAtt
Downstream region at tRNA end position 
ccgatgcctg
Secondary structure (Cloverleaf model)
>W141107058	Leu	TAG
                   T      AAtt ccgatgcctg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     T T C C C     A
      C A A        G      | | | | |     A
    G       A G T G       A A G G G     C
    G         | | |                 T T
    C       A C A C
      A G          G     TGCCTTACGGCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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