The detailed information of tRNA gene sequence


Sequence ID>W141107061
Genome IDAVQI01000012
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 13125
End posion on genome 13039
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggacgaatC
tRNA gene sequence 
GGAAGCGTGGTAGAGCGGTAATACAACGGATTGCTAATCCGTCAGTTCCGTAAGGGCTGG
GCAGGTTCGACTCCTGTCGCTTCCGTat
Downstream region at tRNA end position 
tgttaatttt
Secondary structure (Cloverleaf model)
>W141107061	Ser	GCT
                   C      GTat tgttaatttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     T G T C C     A
        G A        G      + | | | |     G
      C     G A T G       G C A G G     C
      G       | | |                 T T
      G     A T A C
        T A        A     CAGTTCCGTAAGGGCTGG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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