The detailed information of tRNA gene sequence


Sequence ID>W141107069
Genome IDAVQI01000028
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 48935
End posion on genome 49005
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ttccaccgac
tRNA gene sequence 
GCGGCTGTAATATAGCGGTAGTATACGAGCTTCCCAAGCTTGGTGTAGGGGTTCAACTCC
CCCCAGCCGCTaaa
Downstream region at tRNA end position 
actccaaatt
Secondary structure (Cloverleaf model)
>W141107069	Gly	CCC
                   c      Taaa actccaaatt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     C C C C C     A
        G A        A        | | | |     A
      C     T A T A       A G G G G     C
      G     + | | |                 T T
      G     G T A T
        T A        A     GTGT
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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