The detailed information of tRNA gene sequence


Sequence ID>W141107071
Genome IDAVQI01000028
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 54212
End posion on genome 54283
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gtcagtaccg
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACGAAAGATTCTCAATCTTTAAAGACGAGTTCGACTC
TCGTAGGGACCGaaa
Downstream region at tRNA end position 
atagtatttt
Secondary structure (Cloverleaf model)
>W141107071	Glu	CTC
                   g      Gaaa atagtatttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T G C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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