The detailed information of tRNA gene sequence


Sequence ID>W141107073
Genome IDAVQI01000042
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 7688
End posion on genome 7613
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agtgttgttT
tRNA gene sequence 
GGTCCATTAGCTCACCTGGATAGAGCGATTGCCTCCTAAGCAATAGGTAACGCGTTCGAA
TCGCGTATGGGCCGTaa
Downstream region at tRNA end position 
ttaataatta
Secondary structure (Cloverleaf model)
>W141107073	Arg	CCT
                   T      GTaa ttaataatta
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     T G C G C     A
      C C A        A      | | | | |     G
    T       C T C G       A C G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTA
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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