The detailed information of tRNA gene sequence


Sequence ID>W141107081
Genome IDAVQI01000067
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 116792
End posion on genome 116717
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaaatcaC
tRNA gene sequence 
GGGGGCGTAGCGAAGCTGGTTATCGCGCTGGCCTGTCACGCCGGAGACCACGGGTTCGAG
CCCCGTCGCTCCCGTaa
Downstream region at tRNA end position 
caagggctgt
Secondary structure (Cloverleaf model)
>W141107081	Asp	GTC
                   C      GTaa caagggctgt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C G
                    T     T G C C C     A
      C G A        A      | | | | |     G
    T       A G C G       A C G G G     C
    G       | | | |                 T T
    G       T C G C
      T T A        G     AGACC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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