The detailed information of tRNA gene sequence


Sequence ID>W141107082
Genome IDAVQI01000067
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 116543
End posion on genome 116470
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaccgacgaa
tRNA gene sequence 
CGGGCAATAGCGCAGTTGGTAGCGCGCTTGGTTCGGGACCAAGAGGTCGGCGGTTCAAAT
CCGCCTTGCCCGACtg
Downstream region at tRNA end position 
ctgattcctt
Secondary structure (Cloverleaf model)
>W141107082	Pro	CGG
                   a      ACtg ctgattcctt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C G C G       G G C G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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