The detailed information of tRNA gene sequence


Sequence ID>W141107085
Genome IDAVQI01000072
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 10829
End posion on genome 10902
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gacctgcagc
tRNA gene sequence 
GCCGATTTAGCTCAGCTGGTAGCAGCGCGTGATTTGTAATCTCGAGGTCCAGGGTTCGAA
TCCCTGAGTCGGCTttt
Downstream region at tRNA end position 
tggggagttt
Secondary structure (Cloverleaf model)
>W141107085	Thr	TGT
                   c      Tttt tggggagttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T + G
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G         | | |                 T T
    G       C A G C
      T A G        G     AGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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