The detailed information of tRNA gene sequence


Sequence ID>W141107087
Genome IDAVQI01000080
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 162985
End posion on genome 162909
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gctttcaggT
tRNA gene sequence 
GCGCGATTAGCTCAGTTGGTTAGAGTACAAGCATGACACGCTTGGGGTCACTAGTTCGAT
TCTAGTATCGCGCATCg
Downstream region at tRNA end position 
gaaagcggta
Secondary structure (Cloverleaf model)
>W141107087	Val	GAC
                   T      ATCg gaaagcggta
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     T G A T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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