The detailed information of tRNA gene sequence


Sequence ID>W141107088
Genome IDAVQI01000080
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 2854
End posion on genome 2782
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttatcac
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGTAGAGCATACGGCTCATATCCGTAGTGTCTGTGGTTCAATC
CCACATGCCGCTAaat
Downstream region at tRNA end position 
acgctcacac
Secondary structure (Cloverleaf model)
>W141107088	Met	CAT
                   c      Aaat acgctcacac
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     A C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       T G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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