The detailed information of tRNA gene sequence


Sequence ID>W141107089
Genome IDAVQI01000084
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
Start position on genome 9941
End posion on genome 10016
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaacgcgttt
tRNA gene sequence 
GCCCTTGTAGCTCAGTCGGTAGAGCGCAACCATGGTAAGGTTGAGGTCTGCAGTTCGATT
CTGCACGGGGGCTCGA
Downstream region at tRNA end position 
acagtcgaaa
Secondary structure (Cloverleaf model)
>W141107089	Thr	GGT
                   t      TCGA acagtcgaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T T
                    T     A C G T C     A
      T G A        A      | | | | |     G
    C       C T C G       T G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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