The detailed information of tRNA gene sequence


Sequence ID>WENV181166281
Genome IDOEIU01000031
Search identical group
Phylum/Class[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
Species
Start position on genome 113506
End posion on genome 113598
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catcaaccgc
tRNA gene sequence 
GGAGCTGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGGGCAAAACCT
GCATCGAGGGTTCGAATCCCTCCGGCTCCGCCA
Downstream region at tRNA end position 
accacgatcc
Secondary structure (Cloverleaf model)
>WENV181166281	Ser	GCT
                   c      GCCA accacgatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGGGCAAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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