The detailed information of tRNA gene sequence


Sequence ID>WENV181169330
Genome IDOEIV010001460
Search identical group
Phylum/Class[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
Species
Start position on genome 8958
End posion on genome 9034
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttatgcttt
tRNA gene sequence 
CGGGGTGTGGCGCAGTCTGGTAGCGCGCACGTCTGGGGGACGTGAGGTCGCTGGTTCAAG
TCCGGTCACCCCGACCA
Downstream region at tRNA end position 
catagtattt
Secondary structure (Cloverleaf model)
>WENV181169330	Pro	GGG
                   t      ACCA catagtattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        G      + | + | |     A
    C       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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