The detailed information of tRNA gene sequence


Sequence ID>WENV181170604
Genome IDOEIV010062713
Search identical group
Phylum/Class[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
Species
Start position on genome 669
End posion on genome 760
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catttattac
tRNA gene sequence 
GGAGGGGTCGCATAGTGGACTAGTGCGGCAGTTTCGAAAACTGCTGAAGGGATTTTTCCT
TTCCGAGAGTTCGAATCTCTCCCCCTCCGCCA
Downstream region at tRNA end position 
agttttgcaa
Secondary structure (Cloverleaf model)
>WENV181170604	Ser	CGA
                   c      GCCA agttttgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    A       G T G C
      C T A        G     TGAAGGGATTTTTCCTTTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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