The detailed information of tRNA gene sequence


Sequence ID>WENV181173043
Genome IDOEIV011155607
Search identical group
Phylum/Class[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
Species
Start position on genome 132
End posion on genome 57
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gtctggggcc
tRNA gene sequence 
GGGCCCGTAGCTCAATGGTCAGAGCAGGGCGCTCATAACGCCTTGGTTGGGGGTTCAAGT
CCCTCCGGGCCTACCA
Downstream region at tRNA end position 
gacacccgcc
Secondary structure (Cloverleaf model)
>WENV181173043	Ile2	CAT
                   c      ACCA gacacccgcc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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