The detailed information of tRNA gene sequence


Sequence ID>WENV181173124
Genome IDOEIV011217675
Search identical group
Phylum/Class[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
Species
Start position on genome 105
End posion on genome 178
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gtgttttttt
tRNA gene sequence 
GCCTGCCTAGCTCAGTTTGGTAGAGCGCTCCCCTCCTAAGGGAGAGGTCGCGGGTTCGAT
CCCCGCGGTGGGTTgca
Downstream region at tRNA end position 
cttttatttt
Secondary structure (Cloverleaf model)
>WENV181173124	Arg	CCT
                   t      Tgca cttttatttt
                     G + T
                     C - G
                     C - G
                     T + G
                     G + T
                     C - G
                     C - G          C T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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