The detailed information of tRNA gene sequence


Sequence ID>W141115561
Genome IDAVUP01000026
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli HVH 58 (4-2839709) [AVUP]
Start position on genome 17887
End posion on genome 17811
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gggccgctat
tRNA gene sequence 
CCGCCACTGGCTCATCGGGAAAGAGCATCAGCCTTCTAAGTTGACTGTGCGAGGTTCGAG
TCCTCGGTGGCGGTCCA
Downstream region at tRNA end position 
gtactgattt
Secondary structure (Cloverleaf model)
>W141115561	Arg	TCT
                   t      TCCA gtactgattt
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G          T G
                    T     G C T C C     A
      C T A        G      | | | | |     G
    G       C T C G       C G A G G     C
    G       | | | |                 T T
    G       G A G C
      A A A        A     CTGTG
                    T - A
                    C - G
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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