The detailed information of tRNA gene sequence


Sequence ID>WENV181212617
Genome IDOFBS01000240
Search identical group
Phylum/Class[OFBS] metagenome; hydrothermal vent
Species
Start position on genome 1777
End posion on genome 1683
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtgagcacac
tRNA gene sequence 
GGAGGCGTACGTGTCCTGGTGGGCGCCCCGGTCTTCAAAACCGGTGAGGCCGAGCATCTC
GGTCTGGCAGGTTCGATTCCTGTCCGTCTCCGCCA
Downstream region at tRNA end position 
cccgcgcgca
Secondary structure (Cloverleaf model)
>WENV181212617	SeC	TCA
                   c      GCCA cccgcgcgca
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     T   C          T T
                    A     T G T C C     A
      T C C        C      + | | | |     G
    G       T G T G       G C A G G     C
    G       + | + |                 T T
    T       G C G C
      G G          C     TGAGGCCGAGCATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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