The detailed information of tRNA gene sequence


Sequence ID>WENV181226048
Genome IDOFDK01000009
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 211
End posion on genome 286
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
caccagatat
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAAT
CCTCCCCCCGCAACCA
Downstream region at tRNA end position 
aaaaattagt
Secondary structure (Cloverleaf model)
>WENV181226048	fMet	CAT
                   t      ACCA aaaaattagt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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