The detailed information of tRNA gene sequence


Sequence ID>WENV181226085
Genome IDOFDK01000021
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 15601
End posion on genome 15508
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caactaacgt
tRNA gene sequence 
GGAGAAGTACCCAAGATGGTGAAGGGGCGGTCCTGCTAAGACTGTAGGTCGGGGATAACC
CGGCGCGAGGGTTCGAGTCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ttttattata
Secondary structure (Cloverleaf model)
>WENV181226085	Ser	GCT
                   t      GCCA ttttattata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A G A        A      | | | | |     G
    T       A C C C       G A G G G     C
    G         | | |                 T T
    G       A G G G
      T G A        G     TAGGTCGGGGATAACCCGGCGC
                    C - G
                    G + T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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