The detailed information of tRNA gene sequence


Sequence ID>WENV181226107
Genome IDOFDK01000048
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 12892
End posion on genome 12817
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcaccaacgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAGT
CCTTCCCCCGCAACCA
Downstream region at tRNA end position 
aatatggcgg
Secondary structure (Cloverleaf model)
>WENV181226107	fMet	CAT
                   t      ACCA aatatggcgg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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