The detailed information of tRNA gene sequence


Sequence ID>WENV181226161
Genome IDOFDK01000122
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 28177
End posion on genome 28269
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaatagtagc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCACGACTGGAAATCGTGTGTACCCCCAAAAGGG
GTACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV181226161	Ser	GGA
                   c      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACCCCCAAAAGGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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