The detailed information of tRNA gene sequence


Sequence ID>WENV181226294
Genome IDOFDK01002529
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 429
End posion on genome 518
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttggacatc
tRNA gene sequence 
GGGGAGGTGTCCGAATTGGCTAAGGGGCCGGTCTTGAAAACCGGTAAGGCCTTCGCGGCC
ATGTGGGTTCGAGTCCCACCCTCCCCGCCA
Downstream region at tRNA end position 
attttttatt
Secondary structure (Cloverleaf model)
>WENV181226294	Ser	TGA
                   c      GCCA attttttatt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | +                 T T
    G       A G G G
      C T A        G     TAAGGCCTTCGCGGCCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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