The detailed information of tRNA gene sequence


Sequence ID>WENV181228449
Genome IDOFEH01000005
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 33338
End posion on genome 33411
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgtaacttga
tRNA gene sequence 
GGGCCGGTAGCTCAGACTGGAAGAGCGCTCGGTTGGCATCCGAGAGGCCCCGGGTTCAAA
TCCCGGCCGGTCCAttt
Downstream region at tRNA end position 
gaccggtctg
Secondary structure (Cloverleaf model)
>WENV181228449	Ala	GGC
                   a      Attt gaccggtctg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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