The detailed information of tRNA gene sequence


Sequence ID>WENV181228466
Genome IDOFEH01000027
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 52117
End posion on genome 52192
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gaccggaggc
tRNA gene sequence 
GGGCCGGTAGCTCAGCTGGAAGAGCGCCGCCCTCGCACGGCGGAGGTCCCGGGTTCAAGT
CCCGGCCGGTCCACCA
Downstream region at tRNA end position 
tcctcttcgc
Secondary structure (Cloverleaf model)
>WENV181228466	Ala	CGC
                   c      ACCA tcctcttcgc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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