The detailed information of tRNA gene sequence


Sequence ID>WENV181228477
Genome IDOFEH01000035
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 48574
End posion on genome 48488
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaagagctgg
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTCCAAGGCGACGGGCTCGAGACCCGTTACCCGAAAGGGTGCG
TGGGTTCAAATCCCACCCCCGGCGCCA
Downstream region at tRNA end position 
tgaggggcta
Secondary structure (Cloverleaf model)
>WENV181228477	Ser	CGA
                   g      GCCA tgaggggcta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C C A        G     TACCCGAAAGGGTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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