The detailed information of tRNA gene sequence


Sequence ID>WENV181228520
Genome IDOFEH01000105
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 24536
End posion on genome 24611
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
attatcgcgT
tRNA gene sequence 
GGGCCGGTAGCTCAGACTGGAAGAGCGCTCGGCTTGCACCCGAGAGGCCCCGGGTTCAAA
TCCCGGCCGGTCCATtt
Downstream region at tRNA end position 
ttgttaatta
Secondary structure (Cloverleaf model)
>WENV181228520	Ala	TGC
                   T      ATtt ttgttaatta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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