The detailed information of tRNA gene sequence


Sequence ID>WENV181228528
Genome IDOFEH01000122
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2165
End posion on genome 2076
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tataatccta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGAAAGCGGGTGATTTGAAATCACTTGTGGGTTGACGCCCA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taatgttata
Secondary structure (Cloverleaf model)
>WENV181228528	Ser	TGA
                   a      GCCA taatgttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGTGGGTTGACGCCCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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