The detailed information of tRNA gene sequence


Sequence ID>WENV181228531
Genome IDOFEH01000136
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 27146
End posion on genome 27070
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgagagcctt
tRNA gene sequence 
AGCGGCGTAGGGAAGCCTGGTATCCTGCGGGGCTCATAACCCCGAGGTCGGTGGTTCGAA
TCCACCCGCCGCTACCA
Downstream region at tRNA end position 
taacctaaag
Secondary structure (Cloverleaf model)
>WENV181228531	fMet	CAT
                   t      ACCA taacctaaag
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     G
    C       A G G G       G G T G G     C
    T       | | | +                 T T
    G       T C C T
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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