The detailed information of tRNA gene sequence


Sequence ID>WENV181228555
Genome IDOFEH01000189
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 6123
End posion on genome 6046
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgatggcac
tRNA gene sequence 
GCCGCGGTAGTACAGCCCGGCATAGTATGCGGGCCTGTCAAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGCGGCGCCA
Downstream region at tRNA end position 
gccgctcctg
Secondary structure (Cloverleaf model)
>WENV181228555	Asp	GTC
                   c      GCCA gccgctcctg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         C A T G       C C G G G     C
  G         | | | +                 T T
  G         G T A T
    C A T A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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