The detailed information of tRNA gene sequence


Sequence ID>WENV181228559
Genome IDOFEH01000198
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 16537
End posion on genome 16614
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttagatggct
tRNA gene sequence 
GGAGCAGTAGTTCAGCCGGCCCAGAACGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGA
ATCCCGTCTGCTCCGCCA
Downstream region at tRNA end position 
tcttaattaa
Secondary structure (Cloverleaf model)
>WENV181228559	Asp	GTC
                   t      GCCA tcttaattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T G C C C     A
    C C G A        A      + | | | |     G
  G         C T T G       G C G G G     C
  G         | | | |                 T T
  C         G A A C
    C C A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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