The detailed information of tRNA gene sequence


Sequence ID>WENV181228560
Genome IDOFEH01000198
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 16629
End posion on genome 16700
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aattaacgta
tRNA gene sequence 
GGGCCTGTAGCTCAAAGGCAGAGCAGACGGCTCATAACCGTCCGGTTGGAGGTTCGAGTC
CTTCCAGGCCCAtgc
Downstream region at tRNA end position 
ttcttctcat
Secondary structure (Cloverleaf model)
>WENV181228560	Ile2	CAT
                   a      Atgc ttcttctcat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T T C C     A
        A A        A      | + | | |     G
      A     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     CGGTT
                    G - C
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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