The detailed information of tRNA gene sequence


Sequence ID>WENV181228590
Genome IDOFEH01000333
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 6015
End posion on genome 5939
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aattcgcggt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGCGGCGGGCTCCAGACCCGTAGGTCGGGGGTTCAAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
catccggtct
Secondary structure (Cloverleaf model)
>WENV181228590	Trp	CCA
                   t      ACCA catccggtct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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