The detailed information of tRNA gene sequence


Sequence ID>WENV181228618
Genome IDOFEH01000497
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 4616
End posion on genome 4692
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cagaagccac
tRNA gene sequence 
AGCGGGGTAGGGTAGCCTGGTAGCCTGCGGGGCTCATAACCCCGAGGTCCCCGGTTCGAA
TCCGGGCCCCGCTACCA
Downstream region at tRNA end position 
tcgaacctta
Secondary structure (Cloverleaf model)
>WENV181228618	fMet	CAT
                   c      ACCA tcgaacctta
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     G
    C       T G G G       C C C G G     C
    T       + | | +                 T T
    G       G C C T
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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