The detailed information of tRNA gene sequence


Sequence ID>WENV181228620
Genome IDOFEH01000505
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 11599
End posion on genome 11690
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttaggtaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGCGCCCTGCTAAGGCGTTGTACGGTTAAAGCCG
TACCGCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
tattttaact
Secondary structure (Cloverleaf model)
>WENV181228620	Ser	GCT
                   a      GCCA tattttaact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACGGTTAAAGCCGTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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