The detailed information of tRNA gene sequence


Sequence ID>WENV181228633
Genome IDOFEH01000578
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 10894
End posion on genome 10799
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnttat
tRNA gene sequence 
GGGCCCGTAGCTCAGCAAGGTCCAGAGCGGCGGGCTCCAGAGCCGTATGGCGAAGCTACC
CGTAGGTCGTGGGTTCAAATCCCACCGGGCCCACCA
Downstream region at tRNA end position 
tgaatcttgt
Secondary structure (Cloverleaf model)
>WENV181228633	Trp	CCA
                   t      ACCA tgaatcttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     A
  A         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    T C C A        G     ATGGCGAAGCTACCCGTAGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G   G
                  C       A
                  T       G *
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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