The detailed information of tRNA gene sequence


Sequence ID>WENV181228634
Genome IDOFEH01000598
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 9967
End posion on genome 10045
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gagtatagtt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGATTAGAGCGGCGGCCTCCTAAGCCGTAGGTCGTGGGTTCG
AATCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
ggggtcggtt
Secondary structure (Cloverleaf model)
>WENV181228634	Arg	CCT
                   t      GCCA ggggtcggtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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