The detailed information of tRNA gene sequence


Sequence ID>WENV181228637
Genome IDOFEH01000604
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1903
End posion on genome 1980
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacctgtccc
tRNA gene sequence 
GCCCCGGTAGTATAGCCCGGTCAAGTATGTGGGCCTTTCGAGCCCATGACCCGGGTTCAA
ATCCCGGCCGGGGCACCA
Downstream region at tRNA end position 
tgaatatttt
Secondary structure (Cloverleaf model)
>WENV181228637	Glu	TTC
                   c      ACCA tgaatatttt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     TGAC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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