The detailed information of tRNA gene sequence


Sequence ID>WENV181228713
Genome IDOFEH01001447
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 3686
End posion on genome 3594
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaactctta
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTCGAAGGCGCACCGCTGGAAACGGTGTGAAGGGTGATGAGCC
CTTCCGCGGGTTCGAATCCCGCCCCATCCGCCA
Downstream region at tRNA end position 
cttgaaactt
Secondary structure (Cloverleaf model)
>WENV181228713	Ser	GGA
                   a      GCCA cttgaaactt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAAGGGTGATGAGCCCTTCC
                    C - G
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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