The detailed information of tRNA gene sequence


Sequence ID>WENV181228716
Genome IDOFEH01001490
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2675
End posion on genome 2600
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aatagtatgg
tRNA gene sequence 
GCGGCGGTAGTCTAGCCTGGATTAGGACGCTGGCCTTCCAAGCCAGAGGTCCCGGGTTCG
AATCCCGGCCGCCGCAtat
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV181228716	Gly	TCC
                   g      Atat ttttattttt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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