The detailed information of tRNA gene sequence


Sequence ID>WENV181229052
Genome IDOFEJ01000143
Search identical group
Phylum/Class[OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 18450
End posion on genome 18539
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttctccgcta
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCTTGCTAAGGAGTTGTAGGGTTTACAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatctgtttc
Secondary structure (Cloverleaf model)
>WENV181229052	Ser	GCT
                   a      Gttt aatctgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTTACAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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