The detailed information of tRNA gene sequence


Sequence ID>WENV181229588
Genome IDOFEK01000006
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 273510
End posion on genome 273586
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tccagtgtgt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGTATCTGAATGGGGTTCAGAGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tcttttaaaa
Secondary structure (Cloverleaf model)
>WENV181229588	Pro	GGG
                   t      ACCA tcttttaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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