The detailed information of tRNA gene sequence


Sequence ID>WENV181229926
Genome IDOFEK01000121
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 108879
End posion on genome 108966
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaatttaa
tRNA gene sequence 
GCCGAGGTCGCATAGCTAGGATTAGTGCGCCGGACTTGAGATCCGGTTTCCCCTAGGGAA
GCGGGAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
ttcgcttttt
Secondary structure (Cloverleaf model)
>WENV181229926	Ser	TGA
                   a      GCtt ttcgcttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    T C G A        C      | | | | |     A
  A         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    A T T A        G     TTTCCCCTAGGGAAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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