The detailed information of tRNA gene sequence


Sequence ID>WENV181229956
Genome IDOFEK01000141
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 49879
End posion on genome 49784
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgaacgaat
tRNA gene sequence 
GGAGAGGTACCGAAGTGGCCGTAACGGGGTCGACTCGAAATCGACTTGTCCTGTGAAGAG
CAGGGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttgtcgaacc
Secondary structure (Cloverleaf model)
>WENV181229956	Ser	CGA
                   t      GCCA ttgtcgaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  C           | | |                 T T
  C         A C G G
    G T A          G     TTGTCCTGTGAAGAGCAGGGCAC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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