The detailed information of tRNA gene sequence


Sequence ID>WENV181229989
Genome IDOFEK01000161
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 29103
End posion on genome 29026
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggacttatt
tRNA gene sequence 
GGGGTCGTGGGGTAGCTTGGCCTATCCTTCGAGCTTTGGGAGCTTGGGACCTGAGTTCAA
ATCTCAGCGACCCCACCA
Downstream region at tRNA end position 
tttactttct
Secondary structure (Cloverleaf model)
>WENV181229989	Pro	TGG
                   t      ACCA tttactttct
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    T C G A        G      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    C C T A        T     GGAC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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